Training materials
Difficulty level: Beginner
and Keywords: NGS bioinformatics or Phylogenetic tree or R or beacon
and Resource type: Computer Software or e-learning or hands-on tutorial
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e-learning
Introduction to single cell RNAseq analysis workshop
• beginnerbioinformatics RNAseq single cell NGS python R -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
hands-on tutorial
Hands-on for 'R basics in Galaxy' tutorial
• beginnerSoftware engineering data-science interactive-tools R -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Slides, Computer Software
ELIXIR Beacons (at ISMB / ECCB)
• beginnerbeacon