Training materials
Contributors: Collins Assisi or Anatole Chessel or Ion Moraru or Christopher Barnett
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hands-on tutorial
Hands-on for 'Galaxy 101 for everyone' tutorial
• beginnerintroduction -
hands-on tutorial
Hands-on for 'Analysis of molecular dynamics simulations' tutorial
•• intermediateComputational chemistry computational-chemistry -
hands-on tutorial
Hands-on for 'High Throughput Molecular Dynamics and Analysis' tutorial
••• advancedComputational chemistry computational-chemistry -
hands-on tutorial
Hands-on for 'Running molecular dynamics simulations using NAMD' tutorial
•• intermediateComputational chemistry computational-chemistry -
hands-on tutorial
Hands-on for 'Setting up molecular systems' tutorial
•• intermediateComputational chemistry computational-chemistry -
slides
Introduction to 'Introduction to Galaxy Analyses'
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Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
Notes, Scripts
MATHEMATICS BOOT CAMP: Introduction to Complex Systems Tools
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Jupyter notebook, PDF
Introductory image processing on biological images using python.
• beginner