Training materials
Difficulty level: Beginner
and Contributors: Anna Syme or Anthony Bretaudeau or Célia Michotey or Dr. Nils Gehlenborg or Finn Bacall or Ray Sajulga
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tutorial
TeSS, how can I help you?
• beginnerFAIR OPEN Bioinformatics Teaching TeSS -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'A short introduction to Galaxy' tutorial
• beginnerintroduction español -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data submission, annotation, and curation Standardisation and normalisation