hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
The questions this addresses are:
- How to analyze metatranscriptomics data?
- What information can be extracted of metatranscriptomics data?
- How to assign taxa and function to the identified sequences?
The objectives are:
- Choose the best approach to analyze metatranscriptomics data
- Understand the functional microbiome characterization using metatranscriptomic results
- Understand where metatranscriptomics fits in 'multi-omic' analysis of microbiomes
- Visualise a community structure
Licence: Creative Commons Attribution 4.0 International
Keywords: metagenomics, metatranscriptomics
Target audience: Students
Resource type: hands-on tutorial
Contributors: Bérénice Batut, Emma Leith, Pratik Jagtap, Praveen Kumar, Ray Sajulga, Saskia Hiltemann, Subina Mehta
Scientific topics: Metagenomics
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