Training materials
Difficulty level: Intermediate
and Contributors: Anna Fotaki or Eija Korpelainen or Lounès Chikhi or Mikko Rautiainen or Simon Gladman
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediateGenetic variation variant-analysis prokaryote one-health -
slides
Slides for 'Deeper look into Genome Assembly algorithms' tutorial
•• intermediateSequence assembly assembly -
Documentation, Exercise, Handout, Scripts
CPANG19 - Computational PANGenomics (2019)
•• intermediateGenomics -
Documentation, Exercise, Handout, Scripts
PGDH19 - Population Genetics Demographic History: model-based approaches (2019)
•• intermediatePopulation Genomics Phylogenetics -
Documentation, Exercise, Handout, Scripts
CPANG18 - Computational PANGenomics (2018)
•• intermediateGenomics -
Documentation, Exercise, Handout, Scripts
PGDH18 - Population Genetics and Demographic History: model-based approaches (2018)
•• intermediatePopulation Genomics Phylogenetics -
course materials
Single-cell RNA-seq data analysis with R 2022
•• intermediateRNA-Seq RNA-Seq Single Cell technologies scRNA-seq