Training materials
Contributors: Allegra Via or Alvaro Gonzalez or Anton Nekrutenko or Cristóbal Gallardo or Ioana Popescu
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hands-on tutorial
Introduction to Genomics and Galaxy
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Hands-on for 'NGS data logistics' tutorial
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hands-on tutorial
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
Slides for 'Unicycler Assembly' tutorial
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slides
Slides for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial
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slides
Introduction to 'Synthetic Biology'
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slides
Mapping
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Video
A common framework for designing portable federated pipelines
•• intermediateData architecture, analysis and design data access federated data analysis -
Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• intermediateData retrieval Data handling Bioinformatics Biology Biological databases