Training materials
Contributors: Ajay Pillai or Alvaro Gonzalez or Delphine Lariviere or Pavankumar Videm or Vilem Ded
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hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnerTranscriptomics transcriptomics bulk rna-seq collections drosophila QC cyoa -
hands-on tutorial
Hands-on for 'Use Jupyter notebooks in Galaxy' tutorial
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slides
Slides for 'Essential genes detection with Transposon insertion sequencing' tutorial
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slides
Slides for 'Deeper look into Genome Assembly algorithms' tutorial
•• intermediateSequence assembly assembly -
slides
Slides for 'Unicycler Assembly' tutorial
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Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Reproducible analysis
• beginnerData architecture, analysis and design Workflows Literate programming Reproducible Science Data analysis -
Video
A common framework for designing portable federated pipelines
•• intermediateData architecture, analysis and design data access federated data analysis -
Implementing GDPR in a Biomedical Research Institute
•• intermediateData governance Data management GDPR data protection sensitive data -
Notes, Scripts
MATHEMATICS BOOT CAMP: Introduction to Complex Systems Tools
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