Training materials
Authors: nekrut or Stefano Mangiola
and Resource type: Jupyter notebook or Tutorial
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Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics -
Tutorial
Data Manipulation - Collections: Multisample Analysis
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Tutorial
Data Manipulation - Collections: Using dataset collection
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Tutorial
User Interface and Features - Histories: Understanding Galaxy history system
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Tutorial
Assembly - Making sense of a newly assembled genome
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Tutorial
Variant Analysis - Calling very rare variants
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Tutorial
Variant Analysis - Calling variants in diploid systems
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Tutorial
Variant Analysis - Calling variants in non-diploid systems
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Tutorial
Introduction to Galaxy Analyses - NGS data logistics
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Tutorial
Transcriptomics - Reference-based RNAseq data analysis (long)
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