Training materials
Authors: Malachi Griffith or Radhika Khetani @radhika or Jonathan Karr or shiltemann or Lucille Delisle
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Galaxy Introduction for Life Scientists
• beginnerbasic research experimental biology interoperability next generation sequencing reproducibility training michael stadler group -
hands-on tutorial
Hands-on for 'ATAC-Seq data analysis' tutorial
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hands-on tutorial
Hands-on for 'Creating a new tutorial' tutorial
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hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnerTranscriptomics transcriptomics bulk rna-seq collections drosophila QC cyoa -
hands-on tutorial
Hands-on for 'Enable upload via FTP' tutorial
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hands-on tutorial
Hands-on for 'Performant Uploads with TUS' tutorial
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slides
Slides for 'Introduction to ATAC-Seq data analysis' tutorial
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Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science