Training materials
Difficulty level: Intermediate
and Authors: Malachi Griffith or Maria Doyle or Nadia Tonello or Personalized Health Informatics Group or Stéphanie Robin
-
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
hands-on tutorial
Hands-on for 'Long non-coding RNAs (lncRNAs) annotation with FEELnc' tutorial
•• intermediategenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'Visualization of RNA-Seq results with Volcano Plot in R' tutorial
•• intermediatetranscriptomics interactive-tools -
Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
PDF, slide deck / presentation
Elaboración de un Plan de Gestión de Datos (DMP): teoria y práctica
•• intermediateFAIR data Data management ELIXIR-CONVERGE DMP data management plan research data management FAIR principles DMP tools DMP templates tools template competency DMP evaluation evaluation on-line Spanish e-learning