Training materials
Authors: Jan Slifka or joachimwolff or Celia van Gelder or Andrew Mason or Mathieu Bourgey or Nicola Soranzo
-
Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
Video
RDMbites | FASTQ files in colorspace
-
Video
RDMbites | Sequencing Data QC: causes and consequences
-
Video
RDMbites | Sequencing data QC: trimming
-
Video
RDMbites | FASTQ format
-
Video
RDMbites | Sequencing Data QC: FastQC metrics
-
Video
RDMbites | RNAseq expression data
-
hands-on tutorial
Hands-on for 'Calling variants in diploid systems' tutorial
-
hands-on tutorial
Hands-on for 'Scripting Galaxy using the API and BioBlend' tutorial
• beginnerSoftware engineering dev jupyter-notebook -
hands-on tutorial
Hands-on for 'Single-cell quality control with scater' tutorial