Register training material
10 materials found

Authors: Gary Bader  or Marta Lloret Llinares 


FAIR software tools

In this talk, I will discuss the importance of the FAIR principles for the software tools we use to process data. Ranging from small analysis scripts to full fledged data processing pipelines, software needs to be FAIR to enable other researchers to reproduce our own experiments and reuse our...

Scientific topics: Software engineering

Keywords: FAIR, software tools, Software

Resource type: Video

Making cohort data FAIR

Cohort studies, which recruit groups of individuals who share common characteristics and follow them over a period of time, are a robust and essential method in biomedical research for understanding the links between risk factors and diseases. Through questionnaires, medical assessments, and...

Scientific topics: Data management, Data integration and warehousing

Keywords: FAIR data, Cohort data, Ontologies, Standards

Resource type: Video

Introduction to FAIR principles - Open science through FAIR health data networks: dream or reality?

Since the FAIR data principles were published in 2016, many organizations including science funders and governments have adopted these principles to promote and foster true open science collaborations. However, to define a vision and create a video of a Personal Health Train that leverages...

Scientific topics: Data management

Keywords: FAIR data, Health data, Open science

Resource type: Video

Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects

We live in an era of cloud computing. Many of the services in the life sciences are keenly planning cloud transformations, seeking to create globally distributed ecosystems of harmonised data based on standards from organisations like GA4GH. CINECA faces similar challenges, gathering cohort...

Scientific topics: Data architecture, analysis and design

Keywords: Cloud computing, Data analysis, Standards, Translational research

Resource type: Video

Status Update Code of Conduct: Teaming up & Talking about it

Committed to the drafting of a Code of Conduct for the sector of health research according to Art. 40 GDPR, our initiative is advancing slowly but steadily. Throughout Europe, national jurisdictions differ to a great deal in their interpretations of the GDPR, especially in regard to its...

Keywords: GDPR, Healthcare research, data harmonization

Resource type: Video

Pathways and Network Analysis of -Omics data 2018 Module 3-Network Visualization and Analysis with Cytoscape

Course covers the bioinformatics concepts and tools available for interpreting a gene list using pathway and network information.

Pathways and Network Analysis of -Omics Data 2018 Module 1-Introduction to Pathway and Network Analysis

Course covers the bioinformatics concepts and tools available for interpreting a gene list using pathway and network information.

Pathways and Network Analysis of -Omics Data 2017 Module 3-Network Visualization and Analysis with Cytoscape

Course covers the bioinformatics tools available for analyzing and conducting pathway and network analysis on a gene list.

Pathways and Network Analysis 2017 Module 2-Finding Over-Represented Pathways

Course covers the bioinformatics tools available for analyzing and conducting pathway and network analysis on a gene list.

Pathways and Network Analysis of -Omics Data 2017 Module 1-Introduction to Pathway and Network Analysis

Course covers the bioinformatics tools available for analyzing and conducting pathway and network analysis on a gene list.