Training materials
Difficulty level: Beginner
and Authors: Erik Hedman or Jonathan Karr or Malachi Griffith or Marie-Claude Blatter or Tom Freeman
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Introduction to RStudio
• beginnerData management FAIR data RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Scripted analysis with R
• beginnerData management FAIR data Bioinformatics Data visualisation RStudio CONVERGE ggPlot -
Protein Sequence Databases and Sequence Annotation at UniProtKB
• beginneralan bridge group database curation ontology proteins and proteomes training -
Mining enzyme data in UniProtKB using Rhea
• beginnerbiochemistry data mining lipids ontology proteins and proteomes training alan bridge group -
Training materials
Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide
• beginnerBioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material -
Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial
Datanator tutorial
• beginnerMolecular biology Cell biology Systems biology Bioinformatics Omics Query and retrieval Filtering genomics Proteomics transcriptomics Metabolomics reaction kinetics Kinetic modeling meta analysis -
Graphical & Computational Modelling of Biological Pathways
• beginnerGraphical modelling Roslin Institute -
An Introduction to BioLayout Express3D
• beginnerGene expression analysis Roslin Institute
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