Training materials
Difficulty level: Beginner
and Authors: Denise Slenter or Erik Flikkenschild or James Collier or Jonathan Karr
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hands-on tutorial
Gentle Introduction to Python
• beginnerPython script Software engineering Programming Python -
Tutorial, hands-on tutorial
WikiPathways Academy
• beginnerBiology Systems biology Pathway WikiPathways Biocuration -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 2, Data security and privacy
• beginnerFAIR data Data management Data handling Data security Data privacy Data management planning -
Tutorial
SPARQLing Biology: a beginners course
• beginnerBiology Query and retrieval Sparql queries Sparql syntax -
Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial
Datanator tutorial
• beginnerMolecular biology Cell biology Systems biology Bioinformatics Omics Query and retrieval Filtering genomics Proteomics transcriptomics Metabolomics reaction kinetics Kinetic modeling meta analysis -
Tutorial
Rare Disease Pathway and Network Analysis
• beginnerPathway analysis Biological networks Network analysis Pathways -
Jupyter notebooks
Gentle hands-on introduction to Python programming
• beginnerSoftware engineering Python programming