Training materials
Authors: Bert Overduin @bert or Dave Clements or Jonathan Karr or Malachi Griffith or Maria Doyle
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slides
Introduction to 'Introduction to Galaxy Analyses'
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hands-on tutorial
Hands-on for 'Quality Control' tutorial
• beginnerSequence analysis sequence-analysis -
Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE -
Tutorial
Datanator tutorial
• beginnerMolecular biology Cell biology Systems biology Bioinformatics Omics Query and retrieval Filtering genomics Proteomics transcriptomics Metabolomics reaction kinetics Kinetic modeling meta analysis -
Informatics for RNA-Seq Analysis 2018 Module 4-Reference Free Alignment
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Informatics for RNA-Seq Analysis 2018 Module 1-Introduction to RNA Sequencing Analysis