Training materials
Authors: Bazante Sanders or Kathi Zarnack or Lincoln Stein or Maria Levchenko or Marius van den Beek or Vasundra Touré
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
hands-on tutorial
Hands-on for 'Use Apptainer containers for running Galaxy jobs' tutorial
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Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Oxford Nanopore MinION Data' tutorial
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hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Illumina MiSeq Data' tutorial
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hands-on tutorial
Hands-on for 'Use Singularity containers for running Galaxy jobs' tutorial
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hands-on tutorial
Hands-on for 'Performant Uploads with TUS' tutorial
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hands-on tutorial
Hands-on for 'Running Jobs on Remote Resources with Pulsar' tutorial
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hands-on tutorial
Hands-on for 'Python - Subprocess' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook