Training materials
Authors: Anne Fouilloux or Christof De Bo or Jessica Kirkpatrick krkptrc2@illinois.edu or Nicola Soranzo or Simon Gladman
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e-learning
Introduction to CLC Main Workbench
• beginnerSequence alignment Sequence Analysis -
slides
Slides for 'Server Maintenance: Cleanup, Backup, and Restoration' tutorial
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hands-on tutorial
Hands-on for 'Visualize EBV cube data with Panoply netCDF viewer' tutorial
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hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediateGenetic variation variant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'Microbial Variant Calling' tutorial
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hands-on tutorial
Hands-on for 'Calling variants in diploid systems' tutorial
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hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Scripting Galaxy using the API and BioBlend' tutorial
• beginnerSoftware engineering dev jupyter-notebook -
hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerSequence assembly assembly prokaryote -
hands-on tutorial
Hands-on for 'An Introduction to Genome Assembly' tutorial
• beginnerSequence assembly assembly