Training materials
Authors: Anna Syme or Anne Fouilloux or Christof De Bo or Jessica Kirkpatrick krkptrc2@illinois.edu or Maria Doyle or nekrut
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e-learning
Introduction to CLC Main Workbench
• beginnerSequence alignment Sequence Analysis -
hands-on tutorial
Hands-on for 'Large genome assembly and polishing' tutorial
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hands-on tutorial
Hands-on for 'Visualize EBV cube data with Panoply netCDF viewer' tutorial
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hands-on tutorial
Hands-on for 'Microbial Variant Calling' tutorial
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hands-on tutorial
Hands-on for 'CRISPR screen analysis' tutorial
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hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'ATAC-Seq data analysis' tutorial
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hands-on tutorial
Hands-on for 'Chloroplast genome assembly' tutorial
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hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateSequence assembly assembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Visualization of RNA-Seq results with Volcano Plot' tutorial
• beginnerTranscriptomics transcriptomics