Training materials
Authors: Andrew Mason or Lars Juhl Jensen or Paul Yorke or Simon Andrews or allegra.via Via
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hands-on tutorial
FAIRification of an RNAseq dataset
•• intermediateFAIR clinical data -
Video
RDMbites | FASTQ files in colorspace
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Video
RDMbites | Sequencing Data QC: causes and consequences
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Video
RDMbites | Sequencing data QC: trimming
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Video
RDMbites | FASTQ format
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Video
RDMbites | Sequencing Data QC: FastQC metrics
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Video
RDMbites | RNAseq expression data
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation