Workflows
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ELIXIR Structural Bioinformatics 2: Exploring protein domains and functional sites
This training workflow introduces how to search (using query protein sequences or structures) for protein domains, conservation and protein family information, surface and topological interfaces, and possible ligand binding sites.
It is designed to lead you through the process of finding...
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ELIXIR Structural Bioinformatics 3: Predicting the effect of mutation on protein function
This workflow builds on the previous training workflows in this series on building protein models and identifying functional domains or ligand binding sites - and introduces methods to predict how mutations can impact on protein function.
It is designed to lead you through the process of...
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Plant phenotyping and plant genomic data management
A learning path set for plant phenotyping and plant genomic data management with 4 domains : FAIR essentials, plant biological material, plant phenotyping experiment and omics experiments. At the end of the learning path, researchers or data managers specialized in plant research are able to :
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TRUFA RNAseq
TRUFA (Transcriptomes User-Friendly Analysis) is a free webserver designed to help you perform RNA-seq analysis.
So far, TRUFA is allowing you to execute the following steps (programs used are specified in the parentheses):
Reads cleaning:
Reads quality control (FASTQC)
Quality trimming...