Training materials
Tools: MaBoSS or Bioconductor or Data Information System (DAISY) or bio.tools or edgeR
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Online material, Recording, hands-on tutorial
MaBoSS: a tool for modelling biological systems
• beginnerMathematical modelling cancer Signalling boolean modelling logical modelling -
WEBINAR: bio.tools - making it easier to find, understand and cite biological tools and software
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Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics -
Documentation, API reference
bio.tools documentation
• beginnerBioinformatics Data submission, annotation, and curation Computational biology Ontology and terminology Data retrieval Tools Curation Software Sofware curation Tool curation -
Liftr & sbgr
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Implementing GDPR in a Biomedical Research Institute
•• intermediateData governance Data management GDPR data protection sensitive data -
Talk
Discussion: Guidelines for submitting data to ExperimentHub
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Talk
HCA Data Access
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Talk
Single cell updates
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Talk
Pitfalls and best practices for serializing Bioconductor objects