Training materials
Tools: MGnify (was EBI Metagenomics) or HumanMine or R or InterMineR or Cytoscape
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Identifier mapping with Cytoscape
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Tutorial
Metagenomics Bioinformatics
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Webinar
EBI Metagenomics: analysing and exploring metagenomics data
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Analysing and visualising microbiome-derived datasets using the MGnify Web API
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Initiation to R programming and descriptive statistics
• beginnerR-programming Descriptive statistics Statistics Bioinformatics -
Tutorial
InterMine user tutorial
• beginnerData querying Data analysis Data download FAIR -
Documentation
InterMine user manual
• beginnerData querying data visualization Data download FAIR -
Documentation
InterMine operator manual
•• intermediateData integration Data analysis Data publishing FAIR -
InterMine Video tutorials
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Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation