Training materials
Tools: ISMARA or MGnify (was EBI Metagenomics) or ORGANISMS or RStudio or TargetMine or ViralZone
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Introduction to RStudio
• beginnerData management FAIR data RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Scripted analysis with R
• beginnerData management FAIR data Bioinformatics Data visualisation RStudio CONVERGE ggPlot -
e-learning
ViralZone: Studying viral diversity
• beginnerVirology Genomics Molecular biology virology -
e-learning
Retrieve and list information on SARS-CoV-2 from ViralZone
• beginnerVirology Molecular biology SARS-CoV-2 -
e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
Tutorial
Metagenomics Bioinformatics
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Webinar
EBI Metagenomics: analysing and exploring metagenomics data
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Analysing and visualising microbiome-derived datasets using the MGnify Web API
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Initiation to R programming and descriptive statistics
• beginnerR-programming Descriptive statistics Statistics Bioinformatics
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