Training materials
Tools: BridgeDb API or Data Information System (DAISY) or InterMineR or MGnify (was EBI Metagenomics) or MaBoSS or edgeR
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Online material, Recording, hands-on tutorial
MaBoSS: a tool for modelling biological systems
• beginnerMathematical modelling cancer Signalling boolean modelling logical modelling -
Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics -
Tutorial
Metagenomics Bioinformatics
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Webinar
EBI Metagenomics: analysing and exploring metagenomics data
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Analysing and visualising microbiome-derived datasets using the MGnify Web API
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Implementing GDPR in a Biomedical Research Institute
•• intermediateData governance Data management GDPR data protection sensitive data -
Tutorial
InterMine user tutorial
• beginnerData querying Data analysis Data download FAIR -
Documentation
InterMine user manual
• beginnerData querying data visualization Data download FAIR -
Documentation
InterMine operator manual
•• intermediateData integration Data analysis Data publishing FAIR -
Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb