Training materials
Target audience: beginner bioinformaticians or Post-Doctoral Fellows or bioinformaticians or Life scientists
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Slides
Life Sciences Research Data Management 2023 Course by ELIXIR Norway
• beginnerData management Data submission, annotation, and curation Data handling Deposition Data retrieval -
hands-on tutorial
Gentle Introduction to Python
• beginnerPython script Software engineering Programming Python -
hands-on tutorial
Explore Protein Structures with ChimeraX
• beginnerProtein structure analysis Sequence analysis Structure visualisation ChimeraX Protein Structure analysis -
hands-on tutorial
Introduction to Git and Github
• beginnerSoftware engineering Git Github Version control -
hands-on tutorial
Introduction to Research Data Management
• beginnerData quality management Data submission, annotation, and curation Research Data Management Research Publishing -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
slides, R Shiny application
Proteomics Data Analysis (PDA)
•• intermediateProteomics proteomics quantitative proteomics -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Slides
FAIR data - Module 4 (share and publish data)
• beginnerBioinformatics Biology Data management data sharing Data publishing legal framework data warehouse licensing data reuse