Training materials
Target audience: PI or Post-Doctoral Fellows or Veterinarians or beginner bioinformaticians or plant researchers or programmers
-
How to make your messy data usable? / OpenRefine
• beginnerData management Data quality management Data exploration data quality Data validation data cleaning -
Slides
Life Sciences Research Data Management 2023 Course by ELIXIR Norway
• beginnerData management Data submission, annotation, and curation Data handling Deposition Data retrieval -
lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• intermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Initiation to R programming and descriptive statistics
• beginnerR-programming Descriptive statistics Statistics Bioinformatics -
Installation instructions, Manual
How to use Common Workflow Language
• beginnerWorkflows commonwl common workflow language CWL eLearning EeLP -
e-learning
BLAST and multiple sequence alignment (MSA) programs
• beginnerSequence analysis Blast Multiple sequence alignment -
e-learning
Phylogenetics of animal pathogens: basic principles and applications
• beginnerPhylogenetics Veterinary medicine Animal pathogens