Target audience: Intermediate or Bioinformatician
Filename Expansion from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/shell/05-expansion.md.
Instructor's Guide from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/shell/guide.md.
One last Wrinkle from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/regex/07-one-last-wrinkle.md.
Simple Patterns from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/regex/02-simple-patterns.md.
Introduction to Regular Expressions from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/regex/01-intro-regex.md.
Further reading from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/make/05-futher-reading.md.
Automatic variables and wildcards from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/make/02-automatic-variables.md.
Make Reference from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/make/reference.md.
Introducing Distributed Version Control, and Introducing Yourself to Git from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/git/00-intro.md.
Conversational Git from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/git/01-conversational-git.md.
Basic Relational Structure of Git Repositories from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/git/02-relational-structure.md.
A comparison of Make and doit from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/doit/make-vs-doit.md.
Working Remotely from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/shell/02-ssh.md.