Training materials
Target audience: Anyone interested in simulation of metabolic mo... or plant researchers or Anyone interested in data standardization and/o... or Graduate Students or Post Docs
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
lessons
Data Visualisation
• beginnerData visualisation Data Visualization -
Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• intermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Video
Ten simple rules for making training materials FAIR
• beginnerFAIR data Data handling FAIR ELIXIR-CONVERGE -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
Slides
Slides from Data Management Planning Workshop
• beginnerData management Deposition Data retrieval Data handling Data management plan data management -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing