Training materials
Target audience: Anyone interested in simulation of metabolic mo... or Biologists, Genomicists, Computer Scientists or Professors or Undergraduate students or bioinformaticians or data managers or software engineers
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
slides, R Shiny application
Proteomics Data Analysis (PDA)
•• intermediateProteomics proteomics quantitative proteomics -
Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Video, Webinar
ELIXIR CZ Friday Coffee #5: Data Management with Data Stewardship Wizard
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Video, Slides, Webinar
A Gentle Introduction to DSW for Convergers
• beginnerData management Data governance Data managment plan data stewardship data management software tools -
Video, Slides, Webinar
DSW Template Development Kit: The Tutorial
•• intermediateData management data stewardship data management plan FAIR data management software tools DMP templates template development -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Slides
FAIR data - Module 4 (share and publish data)
• beginnerBioinformatics Biology Data management data sharing Data publishing legal framework data warehouse licensing data reuse