Training materials
Target audience: Anyone interested in data standardization and/o... or Anyone interested in simulation of metabolic mo... or Post-Doctoral Fellows or biocurators or postgrad or software engineers
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
Slides
Life Sciences Research Data Management 2023 Course by ELIXIR Norway
• beginnerData management Data submission, annotation, and curation Data handling Deposition Data retrieval -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
e-learning
Genomic Technologies in Clinical Diagnostics: Next Generation Sequencing
••• advancedRare diseases Rare Diseases & Research -
Initiation to R programming and descriptive statistics
• beginnerR-programming Descriptive statistics Statistics Bioinformatics -
Video
Data harmonization and enrichment using EMBL-EBI ontology tools
• beginnerData management Data submission, annotation, and curation Ontology and terminology CINECA data harmonization Annotation Ontologies