Training materials
Target audience: Any students, postdocs or RAs who have an inter... or Anyone interested in simulation of metabolic mo... or Bioimage Analysts or software engineers
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Documentation
InterMine operator manual
•• intermediateData integration Data analysis Data publishing FAIR -
Jupyter notebook, PDF
Introductory image processing on biological images using python.
• beginner -
Introduction to R: A software environment for statistical computing
• beginnerStatistics and probability Software engineering John Innes Centre JIC