Training materials
Target audience: Any student, postdoc or RA who has an interest ... or post-docs or Computational biologists or Research Scientists or Life scientists
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hands-on tutorial
Gentle Introduction to Python
• beginnerPython script Software engineering Programming Python -
hands-on tutorial
Explore Protein Structures with ChimeraX
• beginnerProtein structure analysis Sequence analysis Structure visualisation ChimeraX Protein Structure analysis -
hands-on tutorial
Introduction to Research Data Management
• beginnerData quality management Data submission, annotation, and curation Research Data Management Research Publishing -
hands-on tutorial
Introduction to Git and Github
• beginnerSoftware engineering Git Github Version control -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
Video
Metabolic Control Analysis in COPASI
• beginnerSimulation experiment Systems biology Modelling and simulation Analysis Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Steady State Analysis in COPASI
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation Visualisation -
Video
Time Course Simulation in COPASI
• beginnerSimulation experiment Modelling and simulation Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI