Training materials
Target audience: Any student, postdoc or RA who has an interest ... or Anyone interested in data standardization and/o... or Professors or biocurators or experimeintal biologist researchers or software engineers
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
Slides
Slides from Data Management Planning Workshop
• beginnerData management Deposition Data retrieval Data handling Data management plan data management -
Slides
Slides from Data Management Planning Workshop
• beginnerData management Deposition Data retrieval Data handling Data management plan data management -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Video
Data harmonization and enrichment using EMBL-EBI ontology tools
• beginnerData management Data submission, annotation, and curation Ontology and terminology CINECA data harmonization Annotation Ontologies -
Slides
Slides from Data Management Planning Workshop
• beginnerData management Data handling Data retrieval Deposition Data management plan data management -
Slides
Slides from Data Management Planning Workshop
• beginnerData management Deposition Data retrieval Data handling Data management plan data management