Training materials
Status: Active
and Target audience: Anyone interested in simulation of metabolic mo... or Life scientists with no or little knowledge of ... or bioinformaticians or data manager or postgrad
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
slides, R Shiny application
Proteomics Data Analysis (PDA)
•• intermediateProteomics proteomics quantitative proteomics -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Presentation, course materials
Introduction to Nextflow workshop
• beginnerWorkflows Nextflow DSL2