Standard database or policy: Protein Data Bank in Europe or Ensembl
BridgeDb is a combination of an application programming interface (API), library, and set of data files for mapping identifiers for identical objects [1]. Identifier mapping databases are available for gene products and metabolites. This Bioconductor Vignette explains how to use BridgeDb in the R...
Keywords: ELIXIR RIR, BridgeDb
Resource type: Tutorial, Vignette
Ensembl is a joint project between European Bioinformatics Institute (EMBL-EBI) and the Wellcome Trust Sanger Institute to provide a source of thorough, integrated annotation data across a variety of genomes.
This one-day workshop not only offers participants the opportunity to glean background...
PDBe: Searching for biological macromolecular structures from http://www.ebi.ac.uk/training/online/course/pdbe-searching-biological-macromolecular-structure.
Keywords: Proteins, Chemical biology, Structures
PDBe: Searching the Protein Data Bank from http://www.ebi.ac.uk/training/online/course/pdbe-searching-protein-data-bank.
Keywords: Proteins, Chemical biology, Structures
PDBe: Quick tour from http://www.ebi.ac.uk/training/online/course/pdbe-quick-tour.
Keywords: Proteins, Structures
PDBe: Exploring a Protein Data Bank (PDB) entry from http://www.ebi.ac.uk/training/online/course/pdbe-exploring-protein-data-bank-pdb-entry.
Keywords: Proteins, Chemical biology, Structures
PDBe: An introduction to search and entry pages: webinar from http://www.ebi.ac.uk/training/online/course/pdbe-introduction-search-and-entry-pages-webinar.
Keywords: Proteins, Chemical biology, Structures
Ensembl: Quick tour from http://www.ebi.ac.uk/training/online/course/ensembl-quick-tour-0.
Keywords: DNA RNA
Ensembl: Filmed browser workshop from http://www.ebi.ac.uk/training/online/course/ensembl-filmed-browser-workshop.
Keywords: DNA RNA
Ensembl: Filmed API workshop from http://www.ebi.ac.uk/training/online/course/ensembl-filmed-api-workshop.
Keywords: DNA RNA
Ensembl: Browsing chordate genomes from http://www.ebi.ac.uk/training/online/course/ensembl-browsing-chordate-genomes.
Keywords: DNA RNA
Ensembl Variant Effect Predictor (VEP): webinar from http://www.ebi.ac.uk/training/online/course/ensembl-variant-effect-predictor-vep-webinar.
Keywords: DNA RNA
Ensembl tools: webinar from http://www.ebi.ac.uk/training/online/course/ensembl-tools-webinar.
Keywords: DNA RNA
Ensembl browser webinar series (2016) from http://www.ebi.ac.uk/training/online/course/ensembl-browser-webinar-series-2016.
Keywords: DNA RNA
Ensembl Genomes (non-chordates): Quick tour from http://www.ebi.ac.uk/training/online/course/ensembl-genomes-non-chordates-quick-tour.
Keywords: DNA RNA