Training materials
Standard database or policy: NCBI Gene or Chemical Entities of Biological Interest or STRING: functional protein association networks or Integrated resource of protein families, domain... or OBO Foundry
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Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb -
STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation -
Pathway and Network Analysis 2014 Module 6 - Gene Function Prediction
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Pathway and Network Analysis 2014 Module 3 - Gene Regulation Analysis
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Pathway and Network Analysis 2014 Module 1 - Introduction to Gene Lists
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Bioinformatics: Gene-protein-structure-function
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InterPro: An introduction