Training materials
Standard database or policy: ArrayExpress or BRENDA or FAIRtracks or NCBI Gene or Plant Phenotype Experiment Ontology or Protein Data Bank in Europe or STRING: functional protein association networks
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Presentation
FAIRtracks and Omnipy – FAIRtracks interoperability story
•• intermediateData submission, annotation, and curation Data identity and mapping Data quality management Data governance Workflows Data handling -
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data submission, annotation, and curation Standardisation and normalisation -
BRENDA - The comprehensive Enzyme Information System
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STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation -
Pathway and Network Analysis 2014 Module 6 - Gene Function Prediction
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Pathway and Network Analysis 2014 Module 3 - Gene Regulation Analysis
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Pathway and Network Analysis 2014 Module 1 - Introduction to Gene Lists
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Bioinformatics: Gene-protein-structure-function