Training materials
Scientific topics: Data mining or Data security or Protein expression or Sample collections or Transcription factors and regulatory sites
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Tutorial
From transcriptomics to mechanistic models of signalling
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Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
Recorded webinar
Utilising GPUs in scientific algorithms
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e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
Recorded webinar
Finding and using publicly available data Q&A session
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Recorded webinar
Data protection and security aspects of running simulations on personal data with HPC
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Poster
3DBionotes COVID-19 Structural Hub: A Central Resource for Validation Information and Refined Models
•• intermediateStructural biology Data visualisation Data integration and warehousing Data mining covid-19 Protein models electron microscopy data annotation Web Services (5596) Quality Validation Cryo-Electron Microscopy -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling
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