Training materials
Scientific topics: DNA methylation or Experimental design and studies or Medical informatics or Metatranscriptomics or Pharmacology or Sample collections
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Recorded webinar
Bioinformatic approaches to understand the role of the human microbiome in health and disease
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
Recorded webinar
Open access: Finding and accessing open data
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Recorded webinar
BioStudies database: aggregating all outputs of a life sciences study
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e-learning
MGnify portal: Submitting metagenomics data to the European Nucleotide Archive
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e-learning
MGnify: Quick tour
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Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop
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