Training materials
Resource type: hackathon or Carpentries style curriculum or Life Science Literature Database or course materials
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course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Presentation, hackathon
ELN basics training materials
• beginner -
Presentation, course materials
Introduction to Nextflow workshop
• beginnerWorkflows Nextflow DSL2 -
Life Science Literature Database, Life Sciences Literature Database
Using Europe PMC for effective literature research
• beginnerLiterature search peer reviewed articles Europe PMC, Preprints Data links Annotations Europe PMC, ORCID -
course materials, e-learning
Eurordis Open Academy
• beginnerRare diseases Rare Diseases & Research Rare Diseases -
course materials
Ready For BioData Management?
• beginnerData management Data managment plan -
course materials
Introduction to Persistent Identifiers
•• intermediateData management system relevant metadata for data PID metadata Python API pyhandle Persistent Identifiers