Training materials
Resource type: Jupyter notebook or Manual or Life Sciences Literature Database or E-Learning
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
E-Learning, Training materials
Biology meets Programming - Introduction to Bioinformatics using Python
• beginnerBioinformatics Biology Python Python biologists Programming Data Analysis Sequence Analysis -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
Jupyter notebook
BioExcel Building Blocks (BioBB) Training Material
• beginnermolecular dynamics Docking Modeling life sciences -
Life Sciences Literature Database
Discovering scientific evidence using Europe PMC SciLite annotation
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Life Sciences Literature Database
Finding the data behind research publications with Europe PMC
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Life Science Literature Database, Life Sciences Literature Database
Using Europe PMC for effective literature research
• beginnerLiterature search peer reviewed articles Europe PMC, Preprints Data links Annotations Europe PMC, ORCID -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Installation instructions, Manual
How to use Common Workflow Language
• beginnerWorkflows commonwl common workflow language CWL eLearning EeLP -
Video, Manual, Slides, Installation instructions
How to install and deploy Beacon
• beginnerGenomics genomics open access eLearning EeLP
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