Training materials
Related resources: Proteomics dataset or Workshop FAIR & Data stewardship for the 2021 I... or Genome Annotation dataset or seq-seq-pan or Genomics England PanelApp
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Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Slidedeck
Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Analysis Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
knowledgebase
PanelApp Reviewer’s Guide
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Tutorial
Genome Annotation - Genome annotation with Prokka
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Tutorial
Genome Annotation - Genome Annotation
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Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
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Tutorial
Proteomics - Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
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Tutorial
Proteomics - Peptide and Protein ID using SearchGUI and PeptideShaker
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Tutorial
Proteomics - Secretome Prediction
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Tutorial
Proteomics - Metaproteomics tutorial