Training materials
Related resources: Proteomics dataset or GEEM or Public Health Alliance for Genomic Epidemiology or RStudio basic course
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lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
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Tutorial
Proteomics - Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
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Tutorial
Proteomics - Peptide and Protein ID using SearchGUI and PeptideShaker
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Tutorial
Proteomics - Secretome Prediction
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Tutorial
Proteomics - Metaproteomics tutorial