Training materials
Related resources: Proteomics dataset or GEEM or Development in Galaxy slides or MetaboLights or Beacon v2: a discovery tool for genomic and phe...
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
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Tutorial
Development in Galaxy - Visualizations: generic plugins
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Tutorial
Development in Galaxy - Galaxy Webhooks
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Tutorial
Development in Galaxy - Visualizations: charts plugins
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Tutorial
Proteomics - Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
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Tutorial
Proteomics - Peptide and Protein ID using SearchGUI and PeptideShaker
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Tutorial
Proteomics - Secretome Prediction
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