Training materials
Related resources: Proteomics dataset or GEEM or ChIP-Seq data analysis dataset or CanCOGeN or Galaxy Server administration slides
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Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
Galaxy Server administration - Connecting Galaxy to a compute cluster
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the Estrogen receptor
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Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
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Tutorial
Proteomics - Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
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Tutorial
Proteomics - Peptide and Protein ID using SearchGUI and PeptideShaker
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Tutorial
Proteomics - Secretome Prediction
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Tutorial
Proteomics - Metaproteomics tutorial