Training materials
Related resources: Proteomics dataset or Chipster or Genome Annotation slides or GitHub
-
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
Slides, Training materials, Series of videos
Single-cell RNA-seq data analysis using Chipster 2022
• beginnerscRNA-seq -
Tutorial
Genome Annotation - Genome annotation with Prokka
-
Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
-
Tutorial
Proteomics - Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
-
Tutorial
Proteomics - Peptide and Protein ID using SearchGUI and PeptideShaker
-
Tutorial
Proteomics - Secretome Prediction
-
Tutorial
Proteomics - Metaproteomics tutorial