Training materials
Related resources: Introduction to Galaxy dataset or Associated slides or Public Health Alliance for Genomic Epidemiology or GitHub or Epigenetics dataset
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
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Tutorial
Assembly - Unicycler Assembly
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
Development in Galaxy - Visualizations: generic plugins
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Tutorial
Development in Galaxy - Galaxy Webhooks
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Tutorial
Development in Galaxy - Visualizations: charts plugins
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Tutorial
Assembly - De Bruijn Graph Assembly
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Tutorial
Assembly - Introduction to Genome Assembly
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