Training materials
Related resources: Input datasets or Genomics England PanelApp or Chipster or seq-seq-pan
-
Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Slides, Training materials, Series of videos
Single-cell RNA-seq data analysis using Chipster 2022
• beginnerscRNA-seq -
knowledgebase
PanelApp Reviewer’s Guide
-
Tutorial
Statistics - Interval-Wise Testing for omics data
-
Tutorial
Assembly - Making sense of a newly assembled genome
-
Tutorial
Genome Annotation - Genome annotation with Prokka
-
Tutorial
Genome Annotation - Genome Annotation
-
Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
-
Tutorial
Variant Analysis - Microbial Variant Calling
-
Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer