Training materials
Related resources: Contributing to the Galaxy Training Material sl... or Input datasets or Introduction to Galaxy dataset or MGnify or Public Health Alliance for Genomic Epidemiology or Ready For BioData Management? or Sequence analysis slides
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
Tutorial
Statistics - Interval-Wise Testing for omics data
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Tutorial
Assembly - Making sense of a newly assembled genome
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Tutorial
Genome Annotation - Genome annotation with Prokka
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Tutorial
Genome Annotation - Genome Annotation
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Tutorial
Contributing to the Galaxy Training Material - Contributing with GitHub via command-line
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Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
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Tutorial
Variant Analysis - Microbial Variant Calling