Training materials
Related resources: Contributing to the Galaxy Training Material sl... or GEEM or Input datasets or MetaboLights or Proteomics dataset or Public Health Alliance for Genomic Epidemiology
-
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
Statistics - Interval-Wise Testing for omics data
-
Tutorial
Assembly - Making sense of a newly assembled genome
-
Tutorial
Genome Annotation - Genome annotation with Prokka
-
Tutorial
Genome Annotation - Genome Annotation
-
Tutorial
Contributing to the Galaxy Training Material - Contributing with GitHub via command-line
-
Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
-
Tutorial
Variant Analysis - Microbial Variant Calling